Gut Microbes, Volume 11, Issue 5 (2020)

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Gut Microbes, Volume 11, Issue 5 (2020)

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Commentary and views

Article Commentary
Skin exposure to sunlight: a factor modulating the human gut microbiome composition
Liliane Costa Conteville & Ana Carolina P Vicente
Pages: 1135-1138
Published online: 27 Apr 2020
AbstractforSkin exposure to sunlight: a factor modulating the human gut microbiome composition | Full Text | References | PDF (739.3 KB) | EPUB
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Article Commentary
16S rRNA sequencing analysis: the devil is in the details
Amy M. Tsou, Scott W. Olesen, Eric J. Alm & Scott B. Snapper
Pages: 1139-1142
Published online: 24 Apr 2020
Abstractfor16S rRNA sequencing analysis: the devil is in the details | Full Text | References | PDF (776.6 KB) | EPUB
  • 3471 Views
  • 4 CrossRef citations
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Review

Human behavior, not race or geography, is the strongest predictor of microbial succession in the gut bacteriome of infants
Candice Quin & Deanna L. Gibson
Pages: 1143-1171
Published online: 05 Apr 2020
AbstractforHuman behavior, not race or geography, is the strongest predictor of microbial succession in the gut bacteriome of infants | Full Text | References | PDF (3.6 MB) | EPUB | Supplemental
  • 3655 Views
  • 18 CrossRef citations
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Gut microbiota profiles of autism spectrum disorder and attention deficit/hyperactivity disorder: A systematic literature review.
Caspar Bundgaard-Nielsen, Julie Knudsen, Peter D. C. Leutscher, Marlene B. Lauritsen, Mette Nyegaard, Søren Hagstrøm & Suzette Sørensen
Pages: 1172-1187
Published online: 24 Apr 2020
AbstractforGut microbiota profiles of autism spectrum disorder and attention deficit/hyperactivity disorder: A systematic literature review. | Full Text | References | PDF (2.6 MB) | EPUB | Supplemental
  • 7592 Views
  • 48 CrossRef citations
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Exposure to air pollutants and the gut microbiota: a potential link between exposure, obesity, and type 2 diabetes
Maximillian J. Bailey, Noopur N. Naik, Laura E. Wild, William B. Patterson & Tanya L. Alderete
Pages: 1188-1202
Published online: 29 Apr 2020
AbstractforExposure to air pollutants and the gut microbiota: a potential link between exposure, obesity, and type 2 diabetes | Full Text | References | PDF (2.6 MB) | EPUB | Supplemental
  • 6227 Views
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Host–microbiome interactions: the aryl hydrocarbon receptor as a critical node in tryptophan metabolites to brain signaling
Ning Ma, Ting He, Lee J. Johnston & Xi Ma
Pages: 1203-1219
Published online: 13 May 2020
AbstractforHost–microbiome interactions: the aryl hydrocarbon receptor as a critical node in tryptophan metabolites to brain signaling | Full Text | References | PDF (3.1 MB) | EPUB
  • 6388 Views
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The role of gastric microbiota in gastric cancer
Oliver A. Stewart, Fen Wu & Yu Chen
Pages: 1220-1230
Published online: 23 May 2020
AbstractforThe role of gastric microbiota in gastric cancer | Full Text | References | PDF (1,007.2 KB) | EPUB
  • 12053 Views
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Research Paper

Article
Pasteurized Akkermansia muciniphila increases whole-body energy expenditure and fecal energy excretion in diet-induced obese mice
Clara Depommier, Matthias Van Hul, Amandine Everard, Nathalie M. Delzenne, Willem M. De Vos & Patrice D. Cani
Pages: 1231-1245
Published online: 13 Mar 2020
AbstractforPasteurized Akkermansia muciniphila increases whole-body energy expenditure and fecal energy excretion in diet-induced obese mice | Full Text | References | PDF (4.2 MB) | EPUB | Supplemental
  • 10640 Views
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Research paper/report

Article
Altered gut microbial profile is associated with abnormal metabolism activity of Autism Spectrum Disorder
Zhou Dan, Xuhua Mao, Qisha Liu, Mengchen Guo, Yaoyao Zhuang, Zhi Liu, Kun Chen, Junyu Chen, Rui Xu, Junming Tang, Lianhong Qin, Bing Gu, Kangjian Liu, Chuan Su, Faming Zhang, Yankai Xia, Zhibin Hu & Xingyin Liu
Pages: 1246-1267
Published online: 21 Apr 2020
AbstractforAltered gut microbial profile is associated with abnormal metabolism activity of Autism Spectrum Disorder | Full Text | References | PDF (10.2 MB) | EPUB | Supplemental
  • 22157 Views
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Research Paper/Report

Article
Gut microbiota derived metabolites contribute to intestinal barrier maturation at the suckling-to-weaning transition
Martin Beaumont, Charlotte Paës, Eloïse Mussard, Christelle Knudsen, Laurent Cauquil, Patrick Aymard, Céline Barilly, Béatrice Gabinaud, Olivier Zemb, Sandra Fourre, Roselyne Gautier, Corinne Lencina, Hélène Eutamène, Vassilia Theodorou, Cécile Canlet & Sylvie Combes
Pages: 1268-1286
Published online: 30 Apr 2020
AbstractforGut microbiota derived metabolites contribute to intestinal barrier maturation at the suckling-to-weaning transition | Full Text | References | PDF (4.1 MB) | EPUB | Supplemental
  • 6307 Views
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Article
Klebsiella pneumoniae carriage in low-income countries: antimicrobial resistance, genomic diversity and risk factors
Bich-Tram Huynh, Virginie Passet, Andriniaina Rakotondrasoa, Thierno Diallo, Alexandra Kerleguer, Melanie Hennart, Agathe De Lauzanne, Perlinot Herindrainy, Abdoulaye Seck, Raymond Bercion, Laurence Borand, Maria Pardos de la Gandara, Elisabeth Delarocque-Astagneau, Didier Guillemot, Muriel Vray, Benoit Garin, Jean-Marc Collard, Carla Rodrigues & Sylvain Brisse
Pages: 1287-1299
Published online: 13 May 2020
AbstractforKlebsiella pneumoniae carriage in low-income countries: antimicrobial resistance, genomic diversity and risk factors | Full Text | References | PDF (3.2 MB) | EPUB | Supplemental
  • 4954 Views
  • 33 CrossRef citations
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Article
Metagenomic analysis of the human microbiome reveals the association between the abundance of gut bile salt hydrolases and host health
Baolei Jia, Dongbin Park, Yoonsoo Hahn & Che Ok Jeon
Pages: 1300-1313
Published online: 24 Apr 2020
AbstractforMetagenomic analysis of the human microbiome reveals the association between the abundance of gut bile salt hydrolases and host health | Full Text | References | PDF (2.1 MB) | EPUB | Supplemental
  • 6115 Views
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Article
Amoxicillin or tetracycline in bismuth-containing quadruple therapy as first-line treatment for Helicobacter pylori infection
Chang Seok Bang, Hyun Lim, Hae Min Jeong, Woon Geon Shin, Jae Ho Choi, Jae Seung Soh, Ho Suk Kang, Young Joo Yang, Ji Taek Hong, Suk Pyo Shin, Ki Tae Suk, Jae Jun Lee, Gwang Ho Baik & Dong Joon Kim
Pages: 1314-1323
Published online: 02 May 2020
AbstractforAmoxicillin or tetracycline in bismuth-containing quadruple therapy as first-line treatment for Helicobacter pylori infection | Full Text | References | PDF (1.7 MB) | EPUB
  • 3980 Views
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Article
Rotavirus infection induces glycan availability to promote ileum-specific changes in the microbiome aiding rotavirus virulence
Melinda A. Engevik, Lori D. Banks, Kristen A. Engevik, Alexandra L. Chang-Graham, Jacob L. Perry, Diane S. Hutchinson, Nadim J. Ajami, Joseph F. Petrosino & Joseph M. Hyser
Pages: 1324-1347
Published online: 13 May 2020
AbstractforRotavirus infection induces glycan availability to promote ileum-specific changes in the microbiome aiding rotavirus virulence | Full Text | References | PDF (7.9 MB) | EPUB | Supplemental
  • 3837 Views
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Article
Berberine and its structural analogs have differing effects on functional profiles of individual gut microbiomes
Leyuan Li, Lu Chang, Xu Zhang, Zhibin Ning, Janice Mayne, Yang Ye, Alain Stintzi, Jia Liu & Daniel Figeys
Pages: 1348-1361
Published online: 06 May 2020
AbstractforBerberine and its structural analogs have differing effects on functional profiles of individual gut microbiomes | Full Text | References | PDF (4.3 MB) | EPUB | Supplemental
  • 3956 Views
  • 22 CrossRef citations
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Article
Ethnic diversity in infant gut microbiota is apparent before the introduction of complementary diets
Jia Xu, Blair Lawley, Gerard Wong, Anna Otal, Li Chen, Toh Jia Ying, Xinyi Lin, Wei Wei Pang, Fabian Yap, Yap-Seng Chong, Peter D. Gluckman, Yung Seng Lee, Mary Foong-Fong Chong, Gerald W. Tannock & Neerja Karnani
Pages: 1362-1373
Published online: 26 May 2020
AbstractforEthnic diversity in infant gut microbiota is apparent before the introduction of complementary diets | Full Text | References | PDF (3.9 MB) | EPUB | Supplemental
  • 4349 Views
  • 27 CrossRef citations
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Article
The composition and richness of the gut microbiota differentiate the top Polish endurance athletes from sedentary controls
Maria Kulecka, Barbara Fraczek, Michal Mikula, Natalia Zeber-Lubecka, Jakub Karczmarski, Agnieszka Paziewska, Filip Ambrozkiewicz, Katarzyna Jagusztyn-Krynicka, Paweł Cieszczyk & Jerzy Ostrowski
Pages: 1374-1384
Published online: 13 May 2020
AbstractforThe composition and richness of the gut microbiota differentiate the top Polish endurance athletes from sedentary controls | Full Text | References | PDF (2.8 MB) | EPUB | Supplemental
  • 5417 Views
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Research paper/report

Article
The protective effect of Bifidobacterium bifidum G9-1 against mucus degradation by Akkermansia muciniphila following small intestine injury caused by a proton pump inhibitor and aspirin
Tsutomu Yoshihara, Yosuke Oikawa, Takayuki Kato, Takaomi Kessoku, Takashi Kobayashi, Shingo Kato, Noboru Misawa, Keiichi Ashikari, Akiko Fuyuki, Hidenori Ohkubo, Takuma Higurashi, Yoko Tateishi, Yoshiki Tanaka, Shunji Nakajima, Hiroshi Ohno, Koichiro Wada & Atsushi Nakajima
Pages: 1385-1404
Published online: 09 Jun 2020
AbstractforThe protective effect of Bifidobacterium bifidum G9-1 against mucus degradation by Akkermansia muciniphila following small intestine injury caused by a proton pump inhibitor and aspirin | Full Text | References | PDF (17.5 MB) | EPUB | Supplemental
  • 4698 Views
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Article
Freeze-dried fecal samples are biologically active after long-lasting storage and suited to fecal microbiota transplantation in a preclinical murine model of Clostridioides difficile infection
Julie Reygner, Christine Charrueau, Johanne Delannoy, Camille Mayeur, Véronique Robert, Céline Cuinat, Thierry Meylheuc, Aurélie Mauras, Jérémy Augustin, Ioannis Nicolis, Morgane Modoux, Francisca Joly, Anne-Judith Waligora-Dupriet, Muriel Thomas & Nathalie Kapel
Pages: 1405-1422
Published online: 05 Jun 2020
AbstractforFreeze-dried fecal samples are biologically active after long-lasting storage and suited to fecal microbiota transplantation in a preclinical murine model of Clostridioides difficile infection | Full Text | References | PDF (4.4 MB) | EPUB | Supplemental
  • 5487 Views
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Research Paper/Report

Article
β-arrestin 2 quenches TLR signaling to facilitate the immune evasion of EPEC
Zijuan Chen, Ruixue Zhou, Yihua Zhang, Doudou Hao, Yu Wang, Shichao Huang, Ningning Liu, Chunmei Xia, Nissan Yissachar, Feng Huang, Yiwei Chu & Dapeng Yan
Pages: 1423-1437
Published online: 13 May 2020
Abstractforβ-arrestin 2 quenches TLR signaling to facilitate the immune evasion of EPEC | Full Text | References | PDF (3.6 MB) | EPUB | Supplemental
  • 2045 Views
  • 2 CrossRef citations
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Article
Human milk microbiota development during lactation and its relation to maternal geographic location and gestational hypertensive status
Yi Wan, Jiajing Jiang, Mengqing Lu, Wenfeng Tong, Renke Zhou, Jiaomei Li, Jihong Yuan, Fenglei Wang & Duo Li
Pages: 1438-1449
Published online: 16 Jun 2020
AbstractforHuman milk microbiota development during lactation and its relation to maternal geographic location and gestational hypertensive status | Full Text | References | PDF (6.1 MB) | EPUB | Supplemental
  • 2854 Views
  • 23 CrossRef citations
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Research Paper

Article
Gut microbiota remodeling reverses aging-associated inflammation and dysregulation of systemic bile acid homeostasis in mice sex-specifically
Junli Ma, Ying Hong, Ningning Zheng, Guoxiang Xie, Yuanzhi Lyu, Yu Gu, Chuchu Xi, Linlin Chen, Gaosong Wu, Yue Li, Xin Tao, Jing Zhong, Zhenzhen Huang, Wenbin Wu, Lin Yuan, Min Lin, Xiong Lu, Weidong Zhang, Wei Jia, Lili Sheng & Houkai Li
Pages: 1450-1474
Published online: 09 Jun 2020
AbstractforGut microbiota remodeling reverses aging-associated inflammation and dysregulation of systemic bile acid homeostasis in mice sex-specifically | Full Text | References | PDF (6 MB) | EPUB | Supplemental
  • 8267 Views
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Addendum

Addendum
Microbial and metabolic impacts of trehalose and trehalose analogues
Yiming Zhang & Brian J. DeBosch
Pages: 1475-1482
Published online: 24 Apr 2020
AbstractforMicrobial and metabolic impacts of trehalose and trehalose analogues | Full Text | References | PDF (2 MB) | EPUB
  • 2891 Views
  • 11 CrossRef citations
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