Epigenetics, Volume 17, Issue 10 (2022)

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Epigenetics, Volume 17, Issue 10 (2022)

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Research Paper

Article
Dynamics of methylated cell-free DNA in the urine of non-small cell lung cancer patients
Sander Bach, Birgit M.M. Wever, Mark A. van de Wiel, Joris D. Veltman, Sayed M.S. Hashemi, Geert Kazemier, Idris Bahce & Renske D.M. Steenbergen
Pages: 1057-1069
Published online: 04 Oct 2021
AbstractforDynamics of methylated cell-free DNA in the urine of non-small cell lung cancer patients | Full Text | References | PDF (1.2 MB) | EPUB | Supplemental
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Article
Exercise effects on DNA methylation in EVL, CDKN2A (p14, ARF), and ESR1 in colon tissue from healthy men and women
Catherine Duggan, Ming Yu, Amber R. Willbanks, Jean de Dieu Tapsoba, Ching-Yun Wang, William M. Grady & Anne McTiernan
Pages: 1070-1079
Published online: 06 Oct 2021
AbstractforExercise effects on DNA methylation in EVL, CDKN2A (p14, ARF), and ESR1 in colon tissue from healthy men and women | Full Text | References | PDF (346.7 KB) | EPUB
  • 671 Views
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Free Access
Article
Associations between infant sex and DNA methylation across umbilical cord blood, artery, and placenta samples
Anne K. Bozack, Elena Colicino, Allan C. Just, Robert O. Wright, Andrea A. Baccarelli, Rosalind J. Wright & Alison G. Lee
Pages: 1080-1097
Published online: 22 Oct 2021
AbstractforAssociations between infant sex and DNA methylation across umbilical cord blood, artery, and placenta samples | Full Text | References | PDF (1.2 MB) | EPUB | Supplemental
  • 768 Views
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Article
Longitudinal change in blood DNA epigenetic signature after smoking cessation
Amena Keshawarz, Roby Joehanes, Weihua Guan, Tianxiao Huan, Dawn L. DeMeo, Megan L. Grove, Myriam Fornage, Daniel Levy & George O’Connor
Pages: 1098-1109
Published online: 06 Oct 2021
AbstractforLongitudinal change in blood DNA epigenetic signature after smoking cessation | Full Text | References | PDF (446 KB) | EPUB | Supplemental
  • 810 Views
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Research paper

Article
Spatiotemporal specificity of correlated DNA methylation and gene expression pairs across different human tissues and stages of brain development
Kangli Wang, Rujia Dai, Yan Xia, Jianghua Tian, Chuan Jiao, Tatiana Mikhailova, Chunling Zhang, Chao Chen & Chunyu Liu
Pages: 1110-1127
Published online: 21 Oct 2021
AbstractforSpatiotemporal specificity of correlated DNA methylation and gene expression pairs across different human tissues and stages of brain development | Full Text | References | PDF (3.1 MB) | EPUB | Supplemental
  • 652 Views
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Article
Urinary metals and maternal circulating extracellular vesicle microRNA in the MADRES pregnancy cohort
Caitlin G. Howe, Helen B. Foley, Shohreh F. Farzan, Thomas A. Chavez, Mark Johnson, John D. Meeker, Theresa M. Bastain, Carmen J. Marsit & Carrie V. Breton
Pages: 1128-1142
Published online: 30 Oct 2021
AbstractforUrinary metals and maternal circulating extracellular vesicle microRNA in the MADRES pregnancy cohort | Full Text | References | PDF (1.6 MB) | EPUB | Supplemental
  • 1107 Views
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Research Paper

Article
Epigenome-wide association study of global cortical volumes in generation Scotland: Scottish family health study
Miruna Carmen Barbu, Mat Harris, Xueyi Shen, Stolicyn Aleks, Claire Green, Carmen Amador, Rosie Walker, Stewart Morris, Mark Adams, Anca Sandu, Christopher McNeil, Gordon Waiter, Kathryn Evans, Archie Campbell, Joanna Wardlaw, Douglas Steele, Alison Murray, David Porteous, Andrew McIntosh & Heather Whalley
Pages: 1143-1158
Published online: 23 Nov 2021
AbstractforEpigenome-wide association study of global cortical volumes in generation Scotland: Scottish family health study | Full Text | References | PDF (4.1 MB) | EPUB | Supplemental
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Open Access

Research paper

Article
An investigation into DNA methylation patterns associated with risk preference in older individuals
Laura J. Smyth, Sharon M. Cruise, Jianjun Tang, Ian Young, Bernadette McGuinness, Frank Kee, Amy Jayne McKnight & on behalf of the Northern Ireland COhort for the Longitudinal study of Ageing collaborative group
Pages: 1159-1172
Published online: 30 Oct 2021
AbstractforAn investigation into DNA methylation patterns associated with risk preference in older individuals | Full Text | References | PDF (595.8 KB) | EPUB | Supplemental
  • 3143 Views
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Open Access

Brief Report

Brief Report
Direct bisulphite conversion of cervical samples for DNA methylation analysis
Lisanne Verhoef, A. N Floore, Saskia Doorn, Kate Cuschieri, Ramya Bhatia, A. T Hesselink, Chris J.L.M. Meijer, Renske D.M. Steenbergen & Daniëlle A.M. Heideman
Pages: 1173-1179
Published online: 27 Oct 2021
AbstractforDirect bisulphite conversion of cervical samples for DNA methylation analysis | Full Text | References | PDF (710.9 KB) | EPUB
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Research Paper

Article
Tumour suppressor TET2 safeguards enhancers from aberrant DNA methylation and epigenetic reprogramming in ERα-positive breast cancer cells
Ruitu Lyu, Xuguo Zhu, Yinghui Shen, Lijun Xiong, Lu Liu, Hang Liu, Feizhen Wu, Christian Argueta & Li Tan
Pages: 1180-1194
Published online: 30 Oct 2021
AbstractforTumour suppressor TET2 safeguards enhancers from aberrant DNA methylation and epigenetic reprogramming in ERα-positive breast cancer cells | Full Text | References | PDF (2.1 MB) | EPUB | Supplemental
  • 821 Views
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Free Access
Article
Comparison of EM-seq and PBAT methylome library methods for low-input DNA
Yanan Han, Galina Yurevna Zheleznyakova, Yanara Marincevic-Zuniga, Majid Pahlevan Kakhki, Amanda Raine, Maria Needhamsen & Maja Jagodic
Pages: 1195-1204
Published online: 17 Nov 2021
AbstractforComparison of EM-seq and PBAT methylome library methods for low-input DNA | Full Text | References | PDF (1.6 MB) | EPUB | Supplemental
  • 4438 Views
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Open Access
Article
Overlapping functions of RBBP4 and RBBP7 in regulating cell proliferation and histone H3.3 deposition during mouse preimplantation development
Lieying Xiao, Yanna Dang, Bingjie Hu, Lei Luo, Panpan Zhao, Shaohua Wang & Kun Zhang
Pages: 1205-1218
Published online: 10 Nov 2021
AbstractforOverlapping functions of RBBP4 and RBBP7 in regulating cell proliferation and histone H3.3 deposition during mouse preimplantation development | Full Text | References | PDF (3 MB) | EPUB | Supplemental
  • 981 Views
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Free Access
Article
An integrative epi-transcriptomic approach identifies the human cartilage chitinase 3-like protein 2 (CHI3L2) as a potential mediator of B12 deficiency in adipocytes
B. William Ogunkolade, Antonysunil Adaikalakoteswari, Shirleny Romualdo Cardoso, Rob Lowe, Nisha Patel, Vardhman Rakyan, Sarah Finer, Martin Wabitsch, Ponnusamy Saravanan, Gyanendra Tripathi, Elena Bochukova & Graham A Hitman
Pages: 1219-1233
Published online: 25 Nov 2021
AbstractforAn integrative epi-transcriptomic approach identifies the human cartilage chitinase 3-like protein 2 (CHI3L2) as a potential mediator of B12 deficiency in adipocytes | Full Text | References | PDF (1.9 MB) | EPUB
  • 1870 Views
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Open Access
Article
Selenium-associated differentially expressed microRNAs and their targeted mRNAs across the placental genome in two U.S. birth cohorts
Fu-Ying Tian, Elizabeth M. Kennedy, Karen Hermetz, Amber Burt, Todd M. Everson, Tracy Punshon, Brian P. Jackson, Ke Hao, Jia Chen, Margaret R. Karagas, Devin C. Koestler & Carmen Marsit
Pages: 1234-1245
Published online: 16 Nov 2021
AbstractforSelenium-associated differentially expressed microRNAs and their targeted mRNAs across the placental genome in two U.S. birth cohorts | Full Text | References | PDF (968 KB) | EPUB | Supplemental
  • 414 Views
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Article
Genetic and epigenetic analysis of the serotonin 2A receptor in the context of cocaine abuse
Aysheh Alrfooh & Ryan M. Smith
Pages: 1246-1258
Published online: 23 Nov 2021
AbstractforGenetic and epigenetic analysis of the serotonin 2A receptor in the context of cocaine abuse | Full Text | References | PDF (977.5 KB) | EPUB | Supplemental
  • 470 Views
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Article
Exploring the impact of night shift work on methylation of circadian genes
Jennifer A. Ritonja, Kristan J. Aronson, Lisa Flaten, Danai G. Topouza, Qing Ling Duan, Francine Durocher, Joan E. Tranmer & Parveen Bhatti
Pages: 1259-1268
Published online: 26 Nov 2021
AbstractforExploring the impact of night shift work on methylation of circadian genes | Full Text | References | PDF (576.7 KB) | EPUB | Supplemental
  • 1062 Views
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Article
Anthropometric, biochemical, and haematological indicators associated with hyperhomocysteinemia and their relation to global DNA methylation in a young adult population
Fernanda Hernandez-Landero, Erika Sanchez-Garcia, Nancy Gomez-Crisostomo, Adriana Contreras-Paredes, Martínez Abundis Eduardo & Erick de la Cruz-Hernandez
Pages: 1269-1280
Published online: 18 Dec 2021
AbstractforAnthropometric, biochemical, and haematological indicators associated with hyperhomocysteinemia and their relation to global DNA methylation in a young adult population | Full Text | References | PDF (762.2 KB) | EPUB
  • 381 Views
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Article
Early fish domestication affects methylation of key genes involved in the rapid onset of the farmed phenotype
Tomasz Podgorniak, Anusha Dhanasiri, Xianquan Chen, Xu Ren, Pei-Fen Kuan & Jorge Fernandes
Pages: 1281-1298
Published online: 10 Jan 2022
AbstractforEarly fish domestication affects methylation of key genes involved in the rapid onset of the farmed phenotype | Full Text | References | PDF (1.8 MB) | EPUB
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