Gut Microbes, Volume 12, Issue 1 (2020)

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Gut Microbes, Volume 12, Issue 1 (2020)

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Addendum

Addendum
Mucosal IgG in inflammatory bowel disease – a question of (sub)class?
Tomas Castro-Dopico & Menna R. Clatworthy
Article: 1651596
Published online: 03 Sep 2019
AbstractforMucosal IgG in inflammatory bowel disease – a question of (sub)class? | Full Text | References | PDF (1.1 MB) | EPUB
  • 4396 Views
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Addendum
Origins of human milk microbiota: new evidence and arising questions
Shirin Moossavi & Meghan B. Azad
Article: 1667722
Published online: 04 Nov 2019
AbstractforOrigins of human milk microbiota: new evidence and arising questions | Full Text | References | PDF (2.1 MB) | EPUB
  • 13653 Views
  • 63 CrossRef citations
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Research Paper/Report

Article
Enteric bacteria induce IFNγ and Granzyme B from human colonic Group 1 Innate Lymphoid Cells
Moriah J. Castleman, Stephanie M. Dillon, Christine Purba, Andrew C. Cogswell, Martin McCarter, Edward Barker & Cara Wilson
Article: 1667723
Published online: 04 Oct 2019
AbstractforEnteric bacteria induce IFNγ and Granzyme B from human colonic Group 1 Innate Lymphoid Cells | Full Text | References | PDF (3.2 MB) | EPUB | Supplemental
  • 3012 Views
  • 11 CrossRef citations
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Open Access

Research Article

Article
Triclocarban exposure exaggerates colitis and colon tumorigenesis: roles of gut microbiota involved
Haixia Yang, Katherine Z. Sanidad, Weicang Wang, Minhao Xie, Min Gu, Xiaoqiong Cao, Hang Xiao & Guodong Zhang
Article: 1690364
Published online: 24 Nov 2019
AbstractforTriclocarban exposure exaggerates colitis and colon tumorigenesis: roles of gut microbiota involved | Full Text | References | PDF (4.4 MB) | EPUB | Supplemental
  • 4559 Views
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Open Access

Review

Systematic review of human gut resistome studies revealed variable definitions and approaches
Jeffery Ho, Yun Kit Yeoh, Nilakshi Barua, Zigui Chen, Grace Lui, Sunny H Wong, Xiao Yang, Martin CW Chan, Paul KS Chan, Peter M Hawkey & Margaret Ip
Article: 1700755
Published online: 16 Jan 2020
AbstractforSystematic review of human gut resistome studies revealed variable definitions and approaches | Full Text | References | PDF (2.3 MB) | EPUB | Supplemental
  • 4833 Views
  • 11 CrossRef citations
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Research Paper

Article
Effect of wheat bran derived prebiotic supplementation on gastrointestinal transit, gut microbiota, and metabolic health: a randomized controlled trial in healthy adults with a slow gut transit
Mattea Müller, Gerben D. A. Hermes, Canfora Emanuel E.Jens J. Holst, Erwin G. Zoetendal, Hauke Smidt, Freddy Troost, Frank G. Schaap, Steven Olde Damink, Johan W. E. Jocken, Kaatje Lenaerts, Ad A. M. Masclee & Ellen E. Blaak
Article: 1704141
Published online: 25 Jan 2020
AbstractforEffect of wheat bran derived prebiotic supplementation on gastrointestinal transit, gut microbiota, and metabolic health: a randomized controlled trial in healthy adults with a slow gut transit | Full Text | References | PDF (3.1 MB) | EPUB | Supplemental
  • 7179 Views
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Research Article

Article
Gut microbiota profiles in critically ill patients, potential biomarkers and risk variables for sepsis
Gloria M. Agudelo-Ochoa, Beatriz E. Valdés-Duque, Nubia A. Giraldo-Giraldo, Ana M. Jaillier-Ramírez, Adriana Giraldo-Villa, Irene Acevedo-Castaño, Mónica A. Yepes-Molina, Janeth Barbosa-Barbosa & Alfonso Benítez-Paéz
Article: 1707610
Published online: 10 Jan 2020
AbstractforGut microbiota profiles in critically ill patients, potential biomarkers and risk variables for sepsis | Full Text | References | PDF (3.9 MB) | EPUB | Supplemental
  • 7358 Views
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Research paper/report

Article
Dietary restriction increases protective gut bacteria to rescue lethal methotrexate-induced intestinal toxicity
Duozhuang Tang, Ting Zeng, Yiting Wang, Hui Cui, Jianying Wu, Bing Zou, Zhendong Tao, Liu Zhang, George B. Garside & Si Tao
Article: 1714401
Published online: 26 Jan 2020
AbstractforDietary restriction increases protective gut bacteria to rescue lethal methotrexate-induced intestinal toxicity | Full Text | References | PDF (5.1 MB) | EPUB | Supplemental
  • 3987 Views
  • 21 CrossRef citations
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Open Access

Review

MICROBIOTA INSIGHTS IN CLOSTRIDIUM DIFFICILE INFECTION AND INFLAMMATORY BOWEL DISEASE
C. Rodríguez, E. Romero, L. Garrido-Sanchez, G. Alcaín-Martínez, RJ. Andrade, B. Taminiau, G. Daube & E. García-Fuentes
Article: 1725220
Published online: 04 Mar 2020
AbstractforMICROBIOTA INSIGHTS IN CLOSTRIDIUM DIFFICILE INFECTION AND INFLAMMATORY BOWEL DISEASE | Full Text | References | PDF (2.4 MB) | EPUB
  • 6524 Views
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Research Paper

Article
Oral delivery of Hyperimmune bovine serum antibodies against CS6-expressing enterotoxigenic Escherichia coli as a prophylactic against diarrhea
KR Talaat, CK Porter, AL Bourgeois, TK Lee, CA Duplessis, M Maciel Jr., RL Gutierrez, B DeNearing, B Adjoodani, R Adkinson, KJ Testa, B Feijoo, AN Alcala, J Brubaker, A Beselman, S Chakraborty, D Sack, J Halpern, S Trop, H Wu, J Jiao, E Sullivan, MS Riddle, SS Joseph, ST Poole & MG Prouty
Article: 1732852
Published online: 13 Mar 2020
AbstractforOral delivery of Hyperimmune bovine serum antibodies against CS6-expressing enterotoxigenic Escherichia coli as a prophylactic against diarrhea | Full Text | References | PDF (1.8 MB) | EPUB | Supplemental
  • 1911 Views
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Research paper/report

Article
Probiotic-directed modulation of gut microbiota is basal microbiome dependent
Qiangchuan Hou, Feiyan Zhao, Wenjun Liu, Ruirui Lv, Wei Wei Thwe Khine, Jia Han, Zhihong Sun, Yuan-Kun Lee & Heping Zhang
Article: 1736974
Published online: 21 Mar 2020
AbstractforProbiotic-directed modulation of gut microbiota is basal microbiome dependent | Full Text | References | PDF (4 MB) | EPUB | Supplemental
  • 8492 Views
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Brief Report

Brief Report
The probiotic L. casei LC-XCAL™ improves metabolic health in a diet-induced obesity mouse model without altering the microbiome
Calum J. Walsh, Selena Healy, Paul W. O’Toole, Eileen F. Murphy & Paul D. Cotter
Article: 1747330
Published online: 13 May 2020
AbstractforThe probiotic L. casei LC-XCAL™ improves metabolic health in a diet-induced obesity mouse model without altering the microbiome | Full Text | References | PDF (3.3 MB) | EPUB | Supplemental
  • 3165 Views
  • 14 CrossRef citations
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Research paper/Report

Article
Phosphodiesterase 5 (PDE5) restricts intracellular cGMP accumulation during enterotoxigenic Escherichia coli infection
Jennifer Foulke-Abel, Huimin Yu, Laxmi Sunuwar, Ruxian Lin, James M. Fleckenstein, James B. Kaper & Mark Donowitz
Article: 1752125
Published online: 07 May 2020
AbstractforPhosphodiesterase 5 (PDE5) restricts intracellular cGMP accumulation during enterotoxigenic Escherichia coli infection | Full Text | References | PDF (3.1 MB) | EPUB
  • 2021 Views
  • 14 CrossRef citations
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Research paper

Article
Metagenomics reveals impact of geography and acute diarrheal disease on the Central Indian human gut microbiome
Tanya M. Monaghan, Tim J. Sloan, Stephen R. Stockdale, Adam M. Blanchard, Richard D. Emes, Mark Wilcox, Rima Biswas, Rupam Nashine, Sonali Manke, Jinal Gandhi, Pratishtha Jain, Shrejal Bhotmange, Shrikant Ambalkar, Ashish Satav, Lorraine A. Draper, Colin Hill & Rajpal Singh Kashyap
Article: 1752605
Published online: 27 May 2020
AbstractforMetagenomics reveals impact of geography and acute diarrheal disease on the Central Indian human gut microbiome | Full Text | References | PDF (5.6 MB) | EPUB | Supplemental
  • 6105 Views
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Commentary and views

Article Commentary
An ethical investigation into the microbiome: the intersection of agriculture, genetics, and the obesity epidemic
Hunter Jackson Smith
Article: 1760712
Published online: 20 May 2020
AbstractforAn ethical investigation into the microbiome: the intersection of agriculture, genetics, and the obesity epidemic | Full Text | References | PDF (2.4 MB) | EPUB
  • 4580 Views
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Research Paper

Article
Indonesian children fecal microbiome from birth until weaning was different from microbiomes of their mothers
Wei Wei Thwe Khine, Endang Sutriswati Rahayu, Ting Yi See, Sherwin Kuah, Seppo Salminen, Jiro Nakayama & Yuan-Kun Lee
Article: 1761240
Published online: 26 May 2020
AbstractforIndonesian children fecal microbiome from birth until weaning was different from microbiomes of their mothers | Full Text | References | PDF (4.6 MB) | EPUB | Supplemental
  • 3723 Views
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Research paper

Article
Intestinal permeability, microbial translocation, changes in duodenal and fecal microbiota, and their associations with alcoholic liver disease progression in humans
Luca Maccioni, Bei Gao, Sophie Leclercq, Boris Pirlot, Yves Horsmans, Philippe De Timary, Isabelle Leclercq, Derrick Fouts, Bernd Schnabl & Peter Stärkel
Article: 1782157
Published online: 26 Jun 2020
AbstractforIntestinal permeability, microbial translocation, changes in duodenal and fecal microbiota, and their associations with alcoholic liver disease progression in humans | Full Text | References | PDF (14 MB) | EPUB | Supplemental
  • 5841 Views
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Research Paper

Article
The meconium microbiota shares more features with the amniotic fluid microbiota than the maternal fecal and vaginal microbiota
Qiuwen He, Lai-Yu Kwok, Xiaoxia Xi, Zhi Zhong, Teng Ma, Haiyan Xu, Haixia Meng, Fangqing Zhao & Heping Zhang
Article: 1794266
Published online: 02 Aug 2020
AbstractforThe meconium microbiota shares more features with the amniotic fluid microbiota than the maternal fecal and vaginal microbiota | Full Text | References | PDF (4.1 MB) | EPUB | Supplemental
  • 5736 Views
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Research paper/Report

Article
Peptidase PepP is a novel virulence factor of Campylobacter jejuni contributing to murine campylobacteriosis
Markus M. Heimesaat, Anna-Maria Schmidt, Soraya Mousavi, Ulrike Escher, Nicole Tegtmeyer, Silja Wessler, Gabriele Gadermaier, Peter Briza, Dirk Hofreuter, Stefan Bereswill & Steffen Backert
Article: 1770017
Published online: 25 Jun 2020
AbstractforPeptidase PepP is a novel virulence factor of Campylobacter jejuni contributing to murine campylobacteriosis | Full Text | References | PDF (1.6 MB) | EPUB | Supplemental
  • 1803 Views
  • 9 CrossRef citations
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Research Article

Article
Bifidobacterium longum alleviates irritable bowel syndrome-related visceral hypersensitivity and microbiota dysbiosis via Paneth cell regulation
Chunhua Zhou, Xue Fang, Jiajia Xu, Jun Gao, Ling Zhang, Jiulong Zhao, Yuting Meng, Wei Zhou, Xu Han, Yu Bai, Zhaoshen Li & Duowu Zou
Article: 1782156
Published online: 25 Jun 2020
AbstractforBifidobacterium longum alleviates irritable bowel syndrome-related visceral hypersensitivity and microbiota dysbiosis via Paneth cell regulation | Full Text | References | PDF (19.2 MB) | EPUB | Supplemental
  • 4816 Views
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Research paper

Article
Hemolysin BL from novel Bacillus toyonensis BV-17 induces antitumor activity both in vitro and in vivo
Jiajia Chen, Shoukui Hu, Dengbo Ji, Zhaoya Gao, Hanyang Wang, Yong Yang, Yongkang Chen & Jin Gu
Article: 1782158
Published online: 03 Jul 2020
AbstractforHemolysin BL from novel Bacillus toyonensis BV-17 induces antitumor activity both in vitro and in vivo | Full Text | References | PDF (14.9 MB) | EPUB | Supplemental
  • 2492 Views
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Addendum

Addendum
Toward a porcine in vivo model to analyze the pathogenesis of TLR5-dependent enteropathies
Robert Pieper, Niels van Best, Kira van Vorst, Friederike Ebner, Monika Reissmann, Mathias W. Hornef & Marcus Fulde
Article: 1782163
Published online: 25 Jul 2020
AbstractforToward a porcine in vivo model to analyze the pathogenesis of TLR5-dependent enteropathies | Full Text | References | PDF (1.6 MB) | EPUB
  • 1467 Views
  • 1 CrossRef citations
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Research paper

Article
Changes in the fecal bacterial microbiota associated with disease severity in alcoholic hepatitis patients
Sonja Lang, Bradley Fairfied, Bei Gao, Yi Duan, Xinlian Zhang, Derrick E. Fouts & Bernd Schnabl
Article: 1785251
Published online: 20 Jul 2020
AbstractforChanges in the fecal bacterial microbiota associated with disease severity in alcoholic hepatitis patients | Full Text | References | PDF (3.8 MB) | EPUB | Supplemental
  • 3141 Views
  • 49 CrossRef citations
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Open Access
Article
The gut microbiome stability is altered by probiotic ingestion and improved by the continuous supplementation of galactooligosaccharide
Chenchen Ma, Sanjeev Wasti, Shi Huang, Zeng Zhang, Rajeev Mishra, Shuaiming Jiang, Zhengkai You, Yixuan Wu, Haibo Chang, Yuanyuan Wang, Dongxue Huo, Congfa Li, Zhihong Sun, Zheng Sun & Jiachao Zhang
Article: 1785252
Published online: 14 Jul 2020
AbstractforThe gut microbiome stability is altered by probiotic ingestion and improved by the continuous supplementation of galactooligosaccharide | Full Text | References | PDF (2 MB) | EPUB | Supplemental
  • 8343 Views
  • 35 CrossRef citations
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Open Access
Article
Cathelicidin-mediated lipopolysaccharide signaling via intracellular TLR4 in colonic epithelial cells evokes CXCL8 production
Ravi Holani, Anshu Babbar, Graham A. D. Blyth, Fernando Lopes, Humberto Jijon, Derek M. McKay, Morley D. Hollenberg & Eduardo R. Cobo
Article: 1785802
Published online: 13 Jul 2020
AbstractforCathelicidin-mediated lipopolysaccharide signaling via intracellular TLR4 in colonic epithelial cells evokes CXCL8 production | Full Text | References | PDF (6.5 MB) | EPUB | Supplemental
  • 3179 Views
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Article
Cancer-protective effect of a synbiotic combination between Lactobacillus gasseri 505 and a Cudrania tricuspidata leaf extract on colitis-associated colorectal cancer
Nam Su Oh, Ji Young Lee, You-Tae Kim, Sae Hun Kim & Ju-Hoon Lee
Article: 1785803
Published online: 14 Jul 2020
AbstractforCancer-protective effect of a synbiotic combination between Lactobacillus gasseri 505 and a Cudrania tricuspidata leaf extract on colitis-associated colorectal cancer | Full Text | References | PDF (6.3 MB) | EPUB | Supplemental
  • 10158 Views
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Brief report

Brief Report
Extremely preterm neonates have more Lactobacillus in meconium than very preterm neonates – the in utero microbial colonization hypothesis
Juliana Morais, Cláudia Marques, Diana Teixeira, Catarina Durão, Ana Faria, Sara Brito, Manuela Cardoso, Israel Macedo, Esmeralda Pereira, Teresa Tomé & Conceição Calhau
Article: 1785804
Published online: 13 Jul 2020
AbstractforExtremely preterm neonates have more Lactobacillus in meconium than very preterm neonates – the in utero microbial colonization hypothesis | Full Text | References | PDF (3.1 MB) | EPUB
  • 2678 Views
  • 14 CrossRef citations
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Research paper

Article
Gut microbiota regulate tumor metastasis via circRNA/miRNA networks
Zhuxian Zhu, Jianguo Huang, Xu Li, Jun Xing, Qiang Chen, Ruilin Liu, Feng Hua, Zhongmin Qiu, Yuanlin Song, Chunxue Bai, Yin-Yuan Mo & Ziqiang Zhang
Article: 1788891
Published online: 18 Jul 2020
AbstractforGut microbiota regulate tumor metastasis via circRNA/miRNA networks | Full Text | References | PDF (4.6 MB) | EPUB
  • 10195 Views
  • 46 CrossRef citations
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Open Access
Article
TH1 cell-inducing Escherichia coli strain identified from the small intestinal mucosa of patients with Crohn’s disease
Manabu Nagayama, Tomonori Yano, Koji Atarashi, Takeshi Tanoue, Mariko Sekiya, Yasutoshi Kobayashi, Hirotsugu Sakamoto, Kouichi Miura, Keijiro Sunada, Takaaki Kawaguchi, Satoru Morita, Kayoko Sugita, Seiko Narushima, Nicolas Barnich, Jun Isayama, Yuko Kiridooshi, Atsushi Shiota, Wataru Suda, Masahira Hattori, Hironori Yamamoto & Kenya Honda
Article: 1788898
Published online: 20 Jul 2020
AbstractforTH1 cell-inducing Escherichia coli strain identified from the small intestinal mucosa of patients with Crohn’s disease | Full Text | References | PDF (10.4 MB) | EPUB | Supplemental
  • 4368 Views
  • 33 CrossRef citations
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Open Access
Article
Enterotoxigenic Bacteroides fragilis induces the stemness in colorectal cancer via upregulating histone demethylase JMJD2B
Qian-Qian Liu, Chun-Min Li, Lin-Na Fu, Hao-Lian Wang, Juan Tan, Yun-Qian Wang, Dan-Feng Sun, Qin-Yan Gao, Ying-Xuan Chen & Jing-Yuan Fang
Article: 1788900
Published online: 20 Jul 2020
AbstractforEnterotoxigenic Bacteroides fragilis induces the stemness in colorectal cancer via upregulating histone demethylase JMJD2B | Full Text | References | PDF (11.8 MB) | EPUB | Supplemental
  • 4019 Views
  • 41 CrossRef citations
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Open Access
Article
Alterations of gut microbiota composition in neonates conceived by assisted reproductive technology and its relation to infant growth
Qun Lu, Yuan Lin, Ting Chen, Hong Lv, Feiyang Diao, Cong Liu, Meijuan Peng, Xiufeng Ling, Hong Li, Yun Wang, Yongyue Wei, Jiangbo Du, Guangfu Jin, Yankai Xia, Hongxia Ma, Xingyin Liu, Hongbing Shen & Zhibin Hu
Article: 1794466
Published online: 04 Aug 2020
AbstractforAlterations of gut microbiota composition in neonates conceived by assisted reproductive technology and its relation to infant growth | Full Text | References | PDF (3.8 MB) | EPUB | Supplemental
  • 3574 Views
  • 7 CrossRef citations
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Open Access
Vitamin D supplementation in pregnancy and early infancy in relation to gut microbiota composition and C. difficile colonization: implications for viral respiratory infections
Kelsea M. Drall, Catherine J. Field, Andrea M. Haqq, Russell J. de Souza, Hein M. Tun, Nadia P. Morales-Lizcano, Theodore B. Konya, David S. Guttman, Meghan B. Azad, Allan B. Becker, Diana L. Lefebvre, Piush J. Mandhane, Theo J. Moraes, Malcolm R. Sears, Stuart E. Turvey, Padmaja Subbarao, James A. Scott & Anita L Kozyrskyj
Article: 1799734
Published online: 11 Aug 2020
AbstractforVitamin D supplementation in pregnancy and early infancy in relation to gut microbiota composition and C. difficile colonization: implications for viral respiratory infections | Full Text | References | PDF (610 KB) | EPUB | Supplemental
  • 5785 Views
  • 13 CrossRef citations
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Open Access

Review

Antimicrobial resistance in enteric bacteria: current state and next-generation solutions
M. J. Wallace, S. R. S. Fishbein & G. Dantas
Article: 1799654
Published online: 10 Aug 2020
AbstractforAntimicrobial resistance in enteric bacteria: current state and next-generation solutions | Full Text | References | PDF (1.2 MB) | EPUB
  • 7262 Views
  • 31 CrossRef citations
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Research paper

Article
Reuterin disrupts Clostridioides difficile metabolism and pathogenicity through reactive oxygen species generation
Melinda A. Engevik, Heather A. Danhof, Ritu Shrestha, Alexandra L. Chang-Graham, Joseph M. Hyser, Anthony M. Haag, Mahmoud A. Mohammad, Robert A. Britton, James Versalovic, Joseph A. Sorg & Jennifer K. Spinler
Article: 1795388
Published online: 17 Aug 2020
AbstractforReuterin disrupts Clostridioides difficile metabolism and pathogenicity through reactive oxygen species generation | Full Text | References | PDF (13.6 MB) | EPUB | Supplemental
  • 5048 Views
  • 19 CrossRef citations
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Open Access

Review

Research in a time of enteroids and organoids: how the human gut model has transformed the study of enteric bacterial pathogens
Sridevi Ranganathan, Emily M. Smith, Jennifer D. Foulke-Abel & Eileen M. Barry
Article: 1795389
Published online: 14 Aug 2020
AbstractforResearch in a time of enteroids and organoids: how the human gut model has transformed the study of enteric bacterial pathogens | Full Text | References | PDF (2.2 MB) | EPUB
  • 5533 Views
  • 22 CrossRef citations
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Research paper

Article
Intestinal microbiota-derived tryptophan metabolites are predictive of Ah receptor activity
Fangcong Dong, Fuhua Hao, Iain A. Murray, Philip B. Smith, Imhoi Koo, Alyssa M. Tindall, Penny M. Kris-Etherton, Krishne Gowda, Shantu G. Amin, Andrew D. Patterson & Gary H. Perdew
Article: 1788899
Published online: 12 Aug 2020
AbstractforIntestinal microbiota-derived tryptophan metabolites are predictive of Ah receptor activity | Full Text | References | PDF (11.8 MB) | EPUB | Supplemental
  • 9853 Views
  • 97 CrossRef citations
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Open Access
Article
Dysbiosis in a canine model of human fistulizing Crohn’s disease
Ana Maldonado-Contreras, Lluís Ferrer, Caitlin Cawley, Sarah Crain, Shakti Bhattarai, Juan Toscano, Doyle V. Ward & Andrew Hoffman
Article: 1785246
Published online: 30 Jul 2020
AbstractforDysbiosis in a canine model of human fistulizing Crohn’s disease | Full Text | References | PDF (1.2 MB) | EPUB
  • 2954 Views
  • 8 CrossRef citations
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Article
Modifying macronutrients is superior to microbiome transplantation in treating nonalcoholic fatty liver disease
Fontini Tania Mitsinikos, Denise Chac, Nicholas Schillingford & R. William DePaolo
Article: 1792256
Published online: 20 Aug 2020
AbstractforModifying macronutrients is superior to microbiome transplantation in treating nonalcoholic fatty liver disease | Full Text | References | PDF (3.8 MB) | EPUB | Supplemental
  • 2600 Views
  • 3 CrossRef citations
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Open Access
Article
The development of metabolic endotoxemia is dependent on the type of sweetener and the presence of saturated fat in the diet
Mónica Sánchez-Tapia, Aaron W. Miller, Omar Granados-Portillo, Armando R. Tovar & Nimbe Torres
Article: 1801301
Published online: 17 Aug 2020
AbstractforThe development of metabolic endotoxemia is dependent on the type of sweetener and the presence of saturated fat in the diet | Full Text | References | PDF (9.7 MB) | EPUB | Supplemental
  • 6068 Views
  • 32 CrossRef citations
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Review

Oxidative stress tolerance and antioxidant capacity of lactic acid bacteria as probiotic: a systematic review
Tao Feng & Jing Wang
Article: 1801944
Published online: 14 Aug 2020
AbstractforOxidative stress tolerance and antioxidant capacity of lactic acid bacteria as probiotic: a systematic review | Full Text | References | PDF (2.7 MB) | EPUB
  • 19157 Views
  • 177 CrossRef citations
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Modulation of gut microbiota in healthy rats after exposure to nutritional supplements
Mirna Čoklo, Dina Rešetar Maslov & Sandra Kraljević Pavelić
Article: 1779002
Published online: 26 Aug 2020
AbstractforModulation of gut microbiota in healthy rats after exposure to nutritional supplements | Full Text | References | PDF (1.5 MB) | EPUB
  • 7210 Views
  • 13 CrossRef citations
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Gut microbes from the phylogenetically diverse genus Eubacterium and their various contributions to gut health
Arghya Mukherjee, Cathy Lordan, R. Paul Ross & Paul D. Cotter
Article: 1802866
Published online: 23 Aug 2020
AbstractforGut microbes from the phylogenetically diverse genus Eubacterium and their various contributions to gut health | Full Text | References | PDF (4.9 MB) | EPUB
  • 15322 Views
  • 161 CrossRef citations
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Brief report

Brief Report
Gut commensal microbiota and decreased risk for Enterobacteriaceae bacteriuria and urinary tract infection
Matthew Magruder, Emmanuel Edusei, Lisa Zhang, Shady Albakry, Michael J. Satlin, Lars F. Westblade, Line Malha, Christina Sze, Michelle Lubetzky, Darshana M. Dadhania & John R. Lee
Article: 1805281
Published online: 30 Aug 2020
AbstractforGut commensal microbiota and decreased risk for Enterobacteriaceae bacteriuria and urinary tract infection | Full Text | References | PDF (1.7 MB) | EPUB | Supplemental
  • 4248 Views
  • 33 CrossRef citations
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Open Access

Review

The effects of dairy and dairy derivatives on the gut microbiota: a systematic literature review
Hajara Aslam, Wolfgang Marx, Tetyana Rocks, Amy Loughman, Vinoomika Chandrasekaran, Anu Ruusunen, Samantha L. Dawson, Madeline West, Eva Mullarkey, Julie A. Pasco & Felice N. Jacka
Article: 1799533
Published online: 23 Aug 2020
AbstractforThe effects of dairy and dairy derivatives on the gut microbiota: a systematic literature review | Full Text | References | PDF (1.4 MB) | EPUB
  • 15827 Views
  • 60 CrossRef citations
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Research paper

Article
Pre-therapy fasting slows epithelial turnover and modulates the microbiota but fails to mitigate methotrexate-induced gastrointestinal mucositis
H. R. Wardill, A. R. da Silva Ferreira, S. Lichtenberg Cloo, R. Havinga, H. J. M. Harmsen, W. P. Vermeij & W. J. E. Tissing
Article: 1809332
Published online: 26 Aug 2020
AbstractforPre-therapy fasting slows epithelial turnover and modulates the microbiota but fails to mitigate methotrexate-induced gastrointestinal mucositis | Full Text | References | PDF (1.5 MB) | EPUB
  • 4025 Views
  • 7 CrossRef citations
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Open Access
Article
Growth rate alterations of human colorectal cancer cells by 157 gut bacteria
Rahwa Taddese, Daniel R. Garza, Lilian N. Ruiter, Marien I. de Jonge, Clara Belzer, Steven Aalvink, Iris D. Nagtegaal, Bas E. Dutilh & Annemarie Boleij
Article: 1799733
Published online: 11 Sep 2020
AbstractforGrowth rate alterations of human colorectal cancer cells by 157 gut bacteria | Full Text | References | PDF (5.5 MB) | EPUB | Supplemental
  • 3579 Views
  • 17 CrossRef citations
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Open Access
Article
Impact and consequences of intensive chemotherapy on intestinal barrier and microbiota in acute myeloid leukemia: the role of mucosal strengthening
Thomas Hueso, Kenneth Ekpe, Camille Mayeur, Anna Gatse, Marie Joncquel-Chevallier Curt, Guillaume Gricourt, Christophe Rodriguez, Charles Burdet, Guillaume Ulmann, Christel Neut, Salah-Eddine Amini, Patricia Lepage, Bruno Raynard, Christophe Willekens, Jean-Baptiste Micol, Stéphane De Botton, Ibrahim Yakoub-Agha, Frédéric Gottrand, Jean-Luc Desseyn, Muriel Thomas, Paul-Louis Woerther & David Seguy
Article: 1800897
Published online: 06 Sep 2020
AbstractforImpact and consequences of intensive chemotherapy on intestinal barrier and microbiota in acute myeloid leukemia: the role of mucosal strengthening | Full Text | References | PDF (8.8 MB) | EPUB | Supplemental
  • 4048 Views
  • 35 CrossRef citations
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Research Article

Article
Lactose-reduced infant formula with added corn syrup solids is associated with a distinct gut microbiota in Hispanic infants
Roshonda B. Jones, Paige K. Berger, Jasmine F. Plows, Tanya L. Alderete, Joshua Millstein, Jennifer Fogel, Stanislav N. Iablokov, Dmitry A. Rodionov, Andrei L. Osterman, Lars Bode & Michael I. Goran
Article: 1813534
Published online: 04 Sep 2020
AbstractforLactose-reduced infant formula with added corn syrup solids is associated with a distinct gut microbiota in Hispanic infants | Full Text | References | PDF (4.5 MB) | EPUB | Supplemental
  • 2907 Views
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Article
Young versus aged microbiota transplants to germ-free mice: increased short-chain fatty acids and improved cognitive performance
Juneyoung Lee, Venugopal R. Venna, David J. Durgan, Huanan Shi, Jacob Hudobenko, Nagireddy Putluri, Joseph Petrosino, Louise D. McCullough & Robert M. Bryan
Article: 1814107
Published online: 08 Sep 2020
AbstractforYoung versus aged microbiota transplants to germ-free mice: increased short-chain fatty acids and improved cognitive performance | Full Text | References | PDF (4.1 MB) | EPUB | Supplemental
  • 8704 Views
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Research paper

Article
A porcine ligated loop model reveals new insight into the host immune response against Campylobacter jejuni
Nicholas M Negretti, Yinyin Ye, Lais M Malavasi, Swechha M Pokharel, Steven Huynh, Susan Noh, Cassidy L Klima, Christopher R Gourley, Claude A Ragle, Santanu Bose, Torey Looft, Craig T Parker, Geremy Clair, Joshua N Adkins & Michael E Konkel
Article: 1814121
Published online: 04 Sep 2020
AbstractforA porcine ligated loop model reveals new insight into the host immune response against Campylobacter jejuni | Full Text | References | PDF (5.3 MB) | EPUB | Supplemental
  • 2984 Views
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Article
How oral probiotics affect the severity of an experimental model of progressive multiple sclerosis? Bringing commensal bacteria into the neurodegenerative process
Leyre Mestre, Francisco J. Carrillo-Salinas, Ana Feliú, Miriam Mecha, Graciela Alonso, Carmen Espejo, Laura Calvo-Barreiro, José L. Luque-García, Héctor Estevez, Luisa María Villar & Carmen Guaza
Article: 1813532
Published online: 08 Sep 2020
AbstractforHow oral probiotics affect the severity of an experimental model of progressive multiple sclerosis? Bringing commensal bacteria into the neurodegenerative process | Full Text | References | PDF (7.8 MB) | EPUB
  • 3388 Views
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Review

Bacteria-related changes in host DNA methylation and the risk for CRC
Iradj Sobhani , M.D., Ph.D., Hugo Rotkopf , MD & Khashayarsha Khazaie , Ph.D.; D.Sc
Article: 1800898
Published online: 15 Sep 2020
AbstractforBacteria-related changes in host DNA methylation and the risk for CRC | Full Text | References | PDF (1.8 MB) | EPUB
  • 3592 Views
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Research paper

Article
Metabolite profiling reveals the interaction of chitin-glucan with the gut microbiota
Julie Rodriguez, Audrey M. Neyrinck, Zhengxiao Zhang, Benjamin Seethaler, Julie-Anne Nazare, Cándido Robles Sánchez, Martin Roumain, Giulio G. Muccioli, Laure B. Bindels, Patrice D. Cani, Véronique Maquet, Martine Laville, Stephan C. Bischoff, Jens Walter & Nathalie M. Delzenne
Article: 1810530
Published online: 06 Sep 2020
AbstractforMetabolite profiling reveals the interaction of chitin-glucan with the gut microbiota | Full Text | References | PDF (2.9 MB) | EPUB | Supplemental
  • 4741 Views
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Addendum

Addendum
Understanding the mechanisms of efficacy of fecal microbiota transplant in treating recurrent Clostridioides difficile infection and beyond: the contribution of gut microbial-derived metabolites
Laura Martinez-Gili, Julie a K McDonald, Zhigang Liu, Dina Kao, Jessica R Allegretti, Tanya M Monaghan, Grace F Barker, Jesús Miguéns Blanco, Horace R T Williams, Elaine Holmes, Mark R Thursz, Julian R Marchesi & Benjamin H Mullish
Article: 1810531
Published online: 06 Sep 2020
AbstractforUnderstanding the mechanisms of efficacy of fecal microbiota transplant in treating recurrent Clostridioides difficile infection and beyond: the contribution of gut microbial-derived metabolites | Full Text | References | PDF (1.1 MB) | EPUB | Supplemental
  • 4445 Views
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Research Article

Article
Functional analysis and cryo-electron microscopy of Campylobacterjejuni serine protease HtrA
Urszula Zarzecka, Alessandro Grinzato, Eaazhisai Kandiah, Dominik Cysewski, Paola Berto, Joanna Skorko-Glonek, Giuseppe Zanotti & Steffen Backert
Article: 1810532
Published online: 22 Sep 2020
AbstractforFunctional analysis and cryo-electron microscopy of Campylobacterjejuni serine protease HtrA | Full Text | References | PDF (6.5 MB) | EPUB | Supplemental
  • 2297 Views
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Research Paper

Article
Effects of fecal microbiota transplantation in subjects with irritable bowel syndrome are mirrored by changes in gut microbiome
Rasmus Goll, Peter Holger Johnsen, Erik Hjerde, Joseph Diab, Per Christian Valle, Frank Hilpusch & Jorunn Pauline Cavanagh
Article: 1794263
Published online: 29 Sep 2020
AbstractforEffects of fecal microbiota transplantation in subjects with irritable bowel syndrome are mirrored by changes in gut microbiome | Full Text | References | PDF (1.8 MB) | EPUB | Supplemental
  • 4385 Views
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Article
Prophylactic Faecalibacterium prausnitzii treatment prevents the acute breakdown of colonic epithelial barrier in a preclinical model of pelvic radiation disease
Alexia Lapiere, Mallia Geiger, Véronique Robert, Christelle Demarquay, Sandrine Auger, Sead Chadi, Mohamedamine Benadjaoud, Gabriel Fernandes, Fabien Milliat, Philippe Langella, Marc Benderitter, Jean-Marc Chatel & Alexandra Sémont
Article: 1812867
Published online: 28 Sep 2020
AbstractforProphylactic Faecalibacterium prausnitzii treatment prevents the acute breakdown of colonic epithelial barrier in a preclinical model of pelvic radiation disease | Full Text | References | PDF (4.6 MB) | EPUB | Supplemental
  • 3375 Views
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Article
A novel probiotic therapeutic in a murine model of Clostridioides difficile colitis
Rita D. Shelby, Grace E. Janzow, Lauren Mashburn-Warren, Jeffrey Galley, Natalie Tengberg, Jason Navarro, Miriam Conces, Michael T. Bailey, Steven D. Goodman & Gail E. Besner
Article: 1814119
Published online: 20 Sep 2020
AbstractforA novel probiotic therapeutic in a murine model of Clostridioides difficile colitis | Full Text | References | PDF (7 MB) | EPUB
  • 2808 Views
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Addendum

Addendum
Relationship between gut environment, feces-to-food ratio, and androgen deficiency-induced metabolic disorders
Naoki Harada, Yukari Minami, Kazuki Hanada, Ryo Hanaoka, Yasuyuki Kobayashi, Takeshi Izawa, Takashi Sato, Shigeaki Kato, Hiroshi Inui & Ryoichi Yamaji
Article: 1817719
Published online: 29 Sep 2020
AbstractforRelationship between gut environment, feces-to-food ratio, and androgen deficiency-induced metabolic disorders | Full Text | References | PDF (1.2 MB) | EPUB
  • 4918 Views
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Research Paper

Article
Long-term effects of antimicrobial drugs on the composition of the human gut microbiota
M. Mulder, D. Radjabzadeh, J. C. Kiefte-de Jong, A. G. Uitterlinden, R. Kraaij, B. H. Stricker & A. Verbon
Article: 1791677
Published online: 29 Sep 2020
AbstractforLong-term effects of antimicrobial drugs on the composition of the human gut microbiota | Full Text | References | PDF (2.7 MB) | EPUB | Supplemental
  • 3151 Views
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Article
Changes in dietary fiber intake in mice reveal associations between colonic mucin O-glycosylation and specific gut bacteria
Hasinika K. A. H. Gamage, Raymond W. W. Chong, Daniel Bucio-Noble, Liisa Kautto, Anandwardhan A. Hardikar, Malcolm S. Ball, Mark P. Molloy, Nicolle H. Packer & Ian T. Paulsen
Article: 1802209
Published online: 29 Sep 2020
AbstractforChanges in dietary fiber intake in mice reveal associations between colonic mucin O-glycosylation and specific gut bacteria | Full Text | References | PDF (8.3 MB) | EPUB | Supplemental
  • 12120 Views
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Review

Bacteriophage endolysins as a potential weapon to combat Clostridioides difficile infection
Shakhinur Islam Mondal, Lorraine A. Draper, R Paul Ross & Colin Hill
Article: 1813533
Published online: 28 Sep 2020
AbstractforBacteriophage endolysins as a potential weapon to combat Clostridioides difficile infection | Full Text | References | PDF (2.2 MB) | EPUB
  • 6383 Views
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Research Paper

Article
Gut microbial bile acid metabolite skews macrophage polarization and contributes to high-fat diet-induced colonic inflammation
Lingyu Wang, Zizhen Gong, Xiuyuan Zhang, Fangxinxing Zhu, Yuchen Liu, Chaozhi Jin, Xixi Du, Congfeng Xu, Yingwei Chen, Wei Cai, Chunyan Tian & Jin Wu
Article: 1819155
Published online: 02 Oct 2020
AbstractforGut microbial bile acid metabolite skews macrophage polarization and contributes to high-fat diet-induced colonic inflammation | Full Text | References | PDF (8.2 MB) | EPUB | Supplemental
  • 7250 Views
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Article
Metagenomic analysis reveals distinct patterns of gut lactobacillus prevalence, abundance, and geographical variation in health and disease
Tarini Shankar Ghosh, Jerome Arnoux & Paul W. O’Toole
Article: 1822729
Published online: 28 Sep 2020
AbstractforMetagenomic analysis reveals distinct patterns of gut lactobacillus prevalence, abundance, and geographical variation in health and disease | Full Text | References | PDF (5.5 MB) | EPUB | Supplemental
  • 4809 Views
  • 21 CrossRef citations
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Article
Targeting the gut microbial metabolic pathway with small molecules decreases uremic toxin production
Yingyi Wang, Jianping Li, Chenkai Chen, Jingbo Lu, Jingao Yu, Xuejun Xu, Yin Peng, Sen Zhang, Shu Jiang, Jianming Guo & Jinao Duan
Article: 1823800
Published online: 04 Oct 2020
AbstractforTargeting the gut microbial metabolic pathway with small molecules decreases uremic toxin production | Full Text | References | PDF (7.6 MB) | EPUB
  • 4118 Views
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Article
Gut dysbiosis induced by cardiac pressure overload enhances adverse cardiac remodeling in a T cell-dependent manner
Francisco J Carrillo-Salinas, Marina Anastasiou, Njabulo Ngwenyama, Kuljeet Kaur, Albert Tai, Sasha A. Smolgovsky, David Jetton, Mark Aronovitz & Pilar Alcaide
Article: 1823801
Published online: 25 Oct 2020
AbstractforGut dysbiosis induced by cardiac pressure overload enhances adverse cardiac remodeling in a T cell-dependent manner | Full Text | References | PDF (10 MB) | EPUB
  • 3505 Views
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Article
A compromised developmental trajectory of the infant gut microbiome and metabolome in atopic eczema
Le Duc Huy Ta, James Chun Yip Chan, Gaik Chin Yap, Rikky W. Purbojati, Daniela I. Drautz-Moses, Yanqing Michelle Koh, Carina Jing Xuan Tay, Chiung-Hui Huang, Dorinda Yan Qin Kioh, Jia Yun Woon, Elizabeth Huiwen Tham, Evelyn Xiu Ling Loo, Lynette P.C. Shek, Neerja Karnani, Anne Goh, Hugo P.S. Van Bever, Oon Hoe Teoh, Yiong Huak Chan, Christophe Lay, Jan Knol, Fabian Yap, Kok Hian Tan, Yap-Seng Chong, Keith M. Godfrey, Staffan Kjelleberg, Stephan C. Schuster, Eric Chun Yong Chan & Bee Wah Lee
Article: 1801964
Published online: 06 Oct 2020
AbstractforA compromised developmental trajectory of the infant gut microbiome and metabolome in atopic eczema | Full Text | References | PDF (4.2 MB) | EPUB | Supplemental
  • 8605 Views
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Review

Anti-virulence strategies for Clostridioides difficile infection: advances and roadblocks
David Stewart, Farhan Anwar & Gayatri Vedantam
Article: 1802865
Published online: 23 Oct 2020
AbstractforAnti-virulence strategies for Clostridioides difficile infection: advances and roadblocks | Full Text | References | PDF (954.8 KB) | EPUB
  • 2841 Views
  • 9 CrossRef citations
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Caudal type homeoboxes as a driving force in Helicobacter pylori infection-induced gastric intestinal metaplasia
Hong-Yan Chen, Yi Hu, Nong-Hua Lu & Yin Zhu
Article: 1809331
Published online: 08 Oct 2020
AbstractforCaudal type homeoboxes as a driving force in Helicobacter pylori infection-induced gastric intestinal metaplasia | Full Text | References | PDF (2.1 MB) | EPUB
  • 1744 Views
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Research Paper

Article
Analysis of 16S rRNA genes reveals reduced Fusobacterial community diversity when translocating from saliva to GI sites
Miles Richardson, Jihui Ren, Mara Roxana Rubinstein, Jamila A. Taylor, Richard A. Friedman, Bo Shen & Yiping W. Han
Article: 1814120
Published online: 15 Oct 2020
AbstractforAnalysis of 16S rRNA genes reveals reduced Fusobacterial community diversity when translocating from saliva to GI sites | Full Text | References | PDF (4.6 MB) | EPUB | Supplemental
  • 2483 Views
  • 9 CrossRef citations
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Article
Lactobacillus paracasei KBL382 administration attenuates atopic dermatitis by modulating immune response and gut microbiota
Woon-Ki Kim, You Jin Jang, Dae Hee Han, Kyungchan Jeon, Cheonghoon Lee, Hyuk Seung Han & GwangPyo Ko
Article: 1819156
Published online: 04 Oct 2020
AbstractforLactobacillus paracasei KBL382 administration attenuates atopic dermatitis by modulating immune response and gut microbiota | Full Text | References | PDF (4.9 MB) | EPUB | Supplemental
  • 6505 Views
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Review

The early life education of the immune system: Moms, microbes and (missed) opportunities
Nitya Jain
Article: 1824564
Published online: 12 Oct 2020
AbstractforThe early life education of the immune system: Moms, microbes and (missed) opportunities | Full Text | References | PDF (2.9 MB) | EPUB
  • 6907 Views
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Research Paper

Article
Linear and branched β-Glucans degrading enzymes from versatile Bacteroides uniformis JCM 13288T and their roles in cooperation with gut bacteria
Ravindra Pal Singh, Sivasubramanian Rajarammohan, Raksha Thakur & Mohsin Hassan
Article: 1826761
Published online: 10 Oct 2020
AbstractforLinear and branched β-Glucans degrading enzymes from versatile Bacteroides uniformis JCM 13288T and their roles in cooperation with gut bacteria | Full Text | References | PDF (7.2 MB) | EPUB | Supplemental
  • 3984 Views
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Open Access

Brief Report

Brief Report
Conserved anti-inflammatory effects and sensing of butyrate in zebrafish
Pradeep Manuneedhi Cholan, Alvin Han, Brad R Woodie, Maxinne Watchon, Angela RM Kurz, Angela S Laird, Warwick J Britton, Lihua Ye, Zachary C Holmes, Jessica R McCann, Lawrence A David, John F Rawls & Stefan H Oehlers
Article: 1824563
Published online: 16 Oct 2020
AbstractforConserved anti-inflammatory effects and sensing of butyrate in zebrafish | Full Text | References | PDF (3.7 MB) | EPUB | Supplemental
  • 5129 Views
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Research Paper

Article
Influence of probiotic supplementation on the developing microbiota in human preterm neonates
Niels van Best, Sonja Trepels-Kottek, Paul Savelkoul, Thorsten Orlikowsky, Mathias W. Hornef & John Penders
Article: 1826747
Published online: 23 Oct 2020
AbstractforInfluence of probiotic supplementation on the developing microbiota in human preterm neonates | Full Text | References | PDF (5.3 MB) | EPUB | Supplemental
  • 3923 Views
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Article
Butyrate mediates anti-inflammatory effects of Faecalibacterium prausnitzii in intestinal epithelial cells through Dact3
Marion Lenoir, Rebeca Martín, Edgar Torres-Maravilla, Sead Chadi, Pamela González-Dávila, Harry Sokol, Philippe Langella, Florian Chain & Luis G. Bermúdez-Humarán
Article: 1826748
Published online: 15 Oct 2020
AbstractforButyrate mediates anti-inflammatory effects of Faecalibacterium prausnitzii in intestinal epithelial cells through Dact3 | Full Text | References | PDF (2.3 MB) | EPUB | Supplemental
  • 4775 Views
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Open Access

Addendum

Addendum
Characterization of the intestinal microbiota during Citrobacter rodentium infection in a mouse model of infection-triggered Parkinson’s disease
Tyler Cannon, Anshul Sinha, Louis-Eric Trudeau, Corinne F. Maurice & Samantha Gruenheid
Article: 1830694
Published online: 16 Oct 2020
AbstractforCharacterization of the intestinal microbiota during Citrobacter rodentium infection in a mouse model of infection-triggered Parkinson’s disease | Full Text | References | PDF (563.2 KB) | EPUB
  • 2955 Views
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Research Paper

Article
Dietary cellulose induces anti-inflammatory immunity and transcriptional programs via maturation of the intestinal microbiota
Florence Fischer, Rossana Romero, Anne Hellhund, Uwe Linne, Wilhelm Bertrams, Olaf Pinkenburg, Hosam Shams Eldin, Kai Binder, Ralf Jacob, Alesia Walker, Bärbel Stecher, Marijana Basic, Maik Luu, Rouzbeh Mahdavi, Anna Heintz-Buschart, Alexander Visekruna & Ulrich Steinhoff
Article: 1829962
Published online: 20 Oct 2020
AbstractforDietary cellulose induces anti-inflammatory immunity and transcriptional programs via maturation of the intestinal microbiota | Full Text | References | PDF (9.2 MB) | EPUB | Supplemental
  • 5206 Views
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Article
Quantitative analysis and virulence phenotypes of atypical enteropathogenic Escherichia coli (EPEC) acquired from diarrheal stool samples from a Midwest US hospital
MJ Carlino, SE Kralicek, SA Santiago, LM Sitaraman, AT Harrington & Gail A. Hecht
Article: 1824562
Published online: 01 Nov 2020
AbstractforQuantitative analysis and virulence phenotypes of atypical enteropathogenic Escherichia coli (EPEC) acquired from diarrheal stool samples from a Midwest US hospital | Full Text | References | PDF (4.4 MB) | EPUB | Supplemental
  • 1844 Views
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Open Access

Brief Report

Brief Report
Therapeutic manipulation of gut microbiota by polysaccharides of Wolfiporia cocos reveals the contribution of the gut fungi-induced PGE2 to alcoholic hepatic steatosis
Shanshan Sun, Kai Wang, Li Sun, Baosong Cheng, Shanshan Qiao, Huanqin Dai, Wenyu Shi, Juncai Ma & Hongwei Liu
Article: 1830693
Published online: 27 Oct 2020
AbstractforTherapeutic manipulation of gut microbiota by polysaccharides of Wolfiporia cocos reveals the contribution of the gut fungi-induced PGE2 to alcoholic hepatic steatosis | Full Text | References | PDF (6.1 MB) | EPUB | Supplemental
  • 5544 Views
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Open Access

Editorial

Editorial
The therapeutic landscape for gut bacterial infections: opportunities and limitations
Adam Weiss
Article: 1825076
Published online: 23 Oct 2020
CitationforThe therapeutic landscape for gut bacterial infections: opportunities and limitations | Full Text | References | PDF (175.7 KB) | EPUB
  • 1018 Views
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Open Access

Addendum

Addendum
Lactobacillus lactis CKDB001 ameliorate progression of nonalcoholic fatty liver disease through of gut microbiome: addendum
Na Young Lee, Hyun Chae Joung, Byoung Kook Kim, Byung Yong Kim, Tae Sik Park & Ki Tae Suk
Article: 1829449
Published online: 01 Nov 2020
AbstractforLactobacillus lactis CKDB001 ameliorate progression of nonalcoholic fatty liver disease through of gut microbiome: addendum | Full Text | References | PDF (5.2 MB) | EPUB
  • 2252 Views
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Review

Molecular insights into probiotic mechanisms of action employed against intestinal pathogenic bacteria
Winschau F. van Zyl, Shelly M. Deane & Leon M.T. Dicks
Article: 1831339
Published online: 28 Oct 2020
AbstractforMolecular insights into probiotic mechanisms of action employed against intestinal pathogenic bacteria | Full Text | References | PDF (1.9 MB) | EPUB
  • 10041 Views
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Research Paper

Article
Spermidine improves gut barrier integrity and gut microbiota function in diet-induced obese mice
Lingyan Ma, Yinhua Ni, Zhe Wang, Wenqing Tu, Liyang Ni, Fen Zhuge, Aqian Zheng, Luting Hu, Yufeng Zhao, Liujie Zheng & Zhengwei Fu
Article: 1832857
Published online: 05 Nov 2020
AbstractforSpermidine improves gut barrier integrity and gut microbiota function in diet-induced obese mice | Full Text | References | PDF (14.6 MB) | EPUB | Supplemental
  • 16819 Views
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Article
Enterobactin induces the chemokine, interleukin-8, from intestinal epithelia by chelating intracellular iron
Piu Saha, Beng San Yeoh, Xia Xiao, Rachel M. Golonka, Ahmed A. Abokor, Camilla F. Wenceslau, Yatrik M. Shah, Bina Joe & Matam Vijay-Kumar
Article: 1841548
Published online: 10 Nov 2020
AbstractforEnterobactin induces the chemokine, interleukin-8, from intestinal epithelia by chelating intracellular iron | Full Text | References | PDF (4.1 MB) | EPUB
  • 2296 Views
  • 10 CrossRef citations
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Article
Alcohol decreases intestinal ratio of Lactobacillus to Enterobacteriaceae and induces hepatic immune tolerance in a murine model of DSS-colitis
Paulius V. Kuprys, Abigail R. Cannon, Jennifer Shieh, Noama Iftekhar, Sun K. Park, Joshua M. Eberhardt, Xianzhong Ding & Mashkoor A. Choudhry
Article: 1838236
Published online: 12 Nov 2020
AbstractforAlcohol decreases intestinal ratio of Lactobacillus to Enterobacteriaceae and induces hepatic immune tolerance in a murine model of DSS-colitis | Full Text | References | PDF (3.8 MB) | EPUB | Supplemental
  • 3066 Views
  • 14 CrossRef citations
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Article
Contribution of biofilm formation genetic locus, pgaABCD, to antibiotic resistance development in gut microbiome
Dachuan Lin, Kaichao Chen, Jiubiao Guo, Lianwei Ye, Ruichao Li, Edward Wai Chi Chan & Sheng Chen
Article: 1842992
Published online: 16 Nov 2020
AbstractforContribution of biofilm formation genetic locus, pgaABCD, to antibiotic resistance development in gut microbiome | Full Text | References | PDF (3.5 MB) | EPUB | Supplemental
  • 2323 Views
  • 7 CrossRef citations
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Article
Ulcerative Colitis-associated E. coli pathobionts potentiate colitis in susceptible hosts
Hyungjun Yang, Hengameh Chloé Mirsepasi-Lauridsen, Carsten Struve, Joannie M. Allaire, Adeline Sivignon, Wayne Vogl, Else S. Bosman, Caixia Ma, Abbas Fotovati, Gregor S. Reid, Xiaoxia Li, Andreas Munk Petersen, Sébastien G. Gouin, Nicolas Barnich, Kevan Jacobson, Hong Bing Yu, Karen Angeliki Krogfelt & Bruce A. Vallance
Article: 1847976
Published online: 01 Dec 2020
AbstractforUlcerative Colitis-associated E. coli pathobionts potentiate colitis in susceptible hosts | Full Text | References | PDF (5.1 MB) | EPUB | Supplemental
  • 3903 Views
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Article
Phlorizin ameliorates obesity-associated endotoxemia and insulin resistance in high-fat diet-fed mice by targeting the gut microbiota and intestinal barrier integrity
Xiao-Yu Zhang, Jiang Chen, Kang Yi, Ling Peng, Jie Xie, Xun Gou, Tong Peng & Lin Tang
Article: 1842990
Published online: 23 Nov 2020
AbstractforPhlorizin ameliorates obesity-associated endotoxemia and insulin resistance in high-fat diet-fed mice by targeting the gut microbiota and intestinal barrier integrity | Full Text | References | PDF (15.1 MB) | EPUB | Supplemental
  • 9787 Views
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Article
Dynamics of the bacterial gut microbiota during controlled human infection with Necator americanus larvae
Q. R. Ducarmon, M. A. Hoogerwerf, J. J. Janse, A. R. Geelen, J. P. R. Koopman, R. D. Zwittink, J. J. Goeman, E. J. Kuijper & M. Roestenberg
Article: 1840764
Published online: 23 Nov 2020
AbstractforDynamics of the bacterial gut microbiota during controlled human infection with Necator americanus larvae | Full Text | References | PDF (671.5 KB) | EPUB | Supplemental
  • 2020 Views
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Article
Altered gut bacterial and metabolic signatures and their interaction in gestational diabetes mellitus
Xing Wang, Hongli Liu, Yifan Li, Shuai Huang, Lan Zhang, Chiying Cao, Philip N. Baker, Chao Tong, Peng Zheng & Hongbo Qi
Article: 1840765
Published online: 23 Nov 2020
AbstractforAltered gut bacterial and metabolic signatures and their interaction in gestational diabetes mellitus | Full Text | References | PDF (6.9 MB) | EPUB | Supplemental
  • 6718 Views
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Article
Microbial enterotypes beyond genus level: Bacteroides species as a predictive biomarker for weight change upon controlled intervention with arabinoxylan oligosaccharides in overweight subjects
Lars Christensen, Claudia V. Sørensen, Frederikke U. Wøhlk, Louise Kjølbæk, Arne Astrup, Yolanda Sanz, Mads F. Hjorth & Alfonso Benítez-Páez
Article: 1847627
Published online: 15 Dec 2020
AbstractforMicrobial enterotypes beyond genus level: Bacteroides species as a predictive biomarker for weight change upon controlled intervention with arabinoxylan oligosaccharides in overweight subjects | Full Text | References | PDF (3.4 MB) | EPUB | Supplemental
  • 4567 Views
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Article
Neonatal gut colonization by Bifidobacterium is associated with higher childhood cytokine responses
Hardis Rabe, Anna-Carin Lundell, Fei Sjöberg, Annika Ljung, Anna Strömbeck, Monica Gio-Batta, Cristina Maglio, Inger Nordström, Kerstin Andersson, Intawat Nookaew, Agnes E. Wold, Ingegerd Adlerberth & Anna Rudin
Article: 1847628
Published online: 04 Dec 2020
AbstractforNeonatal gut colonization by Bifidobacterium is associated with higher childhood cytokine responses | Full Text | References | PDF (2 MB) | EPUB | Supplemental
  • 2153 Views
  • 17 CrossRef citations
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Article
Metabolic impact of persistent organic pollutants on gut microbiota
Yuan Tian, Wei Gui, Bipin Rimal, Imhoi Koo, Philip B. Smith, Robert G. Nichols, Jingwei Cai, Qing Liu & Andrew D. Patterson
Article: 1848209
Published online: 09 Dec 2020
AbstractforMetabolic impact of persistent organic pollutants on gut microbiota | Full Text | References | PDF (11.1 MB) | EPUB | Supplemental
  • 3742 Views
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Open Access

Brief Report

Brief Report
The role of gut vascular barrier in experimental alcoholic liver disease and A. muciniphila supplementation
Christoph Grander, Felix Grabherr, Ilaria Spadoni, Barbara Enrich, Georg Oberhuber, Maria Rescigno & Herbert Tilg
Article: 1851986
Published online: 01 Dec 2020
AbstractforThe role of gut vascular barrier in experimental alcoholic liver disease and A. muciniphila supplementation | Full Text | References | PDF (3.2 MB) | EPUB
  • 2063 Views
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Research Paper

Article
From correlation to causality: the case of Subdoligranulum
Matthias Van Hul, Tiphaine Le Roy, Edi Prifti, Maria Carlota Dao, Adrien Paquot, Jean-Daniel Zucker, Nathalie M. Delzenne, Giulio G. Muccioli, Karine Clément & Patrice D. Cani
Article: 1849998
Published online: 15 Dec 2020
AbstractforFrom correlation to causality: the case of Subdoligranulum | Full Text | References | PDF (3.7 MB) | EPUB | Supplemental
  • 8347 Views
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Open Access
Article
Personalized B cell response to the Lactobacillus rhamnosus GG probiotic in healthy human subjects: a randomized trial
Jette Bornholdt, Christa Broholm, Yun Chen, Alfredo Rago, Stine Sloth, Jakob Hendel, Cathrine Melsæther, Christina V. Müller, Maria Juul Nielsen, Jesper Strickertsson, Lars Engelholm, Kristoffer Vitting-Seerup, Kim B. Jensen, Adam Baker & Albin Sandelin
Article: 1854639
Published online: 04 Dec 2020
AbstractforPersonalized B cell response to the Lactobacillus rhamnosus GG probiotic in healthy human subjects: a randomized trial | Full Text | References | PDF (3.2 MB) | EPUB | Supplemental
  • 2511 Views
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Article
Host miRNA-21 promotes liver dysfunction by targeting small intestinal Lactobacillus in mice
André A. Santos, Marta B. Afonso, Ricardo S. Ramiro, David Pires, Madalena Pimentel, Rui E. Castro & Cecília M.P. Rodrigues
Article: 1840766
Published online: 10 Dec 2020
AbstractforHost miRNA-21 promotes liver dysfunction by targeting small intestinal Lactobacillus in mice | Full Text | References | PDF (8.7 MB) | EPUB | Supplemental
  • 2956 Views
  • 23 CrossRef citations
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Article
Stratification of athletes’ gut microbiota: the multifaceted hubs associated with dietary factors, physical characteristics and performance
Maozhen Han, Kun Yang, Pengshuo Yang, Chaofang Zhong, Chaoyun Chen, Song Wang, Qunwei Lu & Kang Ning
Article: 1842991
Published online: 08 Dec 2020
AbstractforStratification of athletes’ gut microbiota: the multifaceted hubs associated with dietary factors, physical characteristics and performance | Full Text | References | PDF (7.4 MB) | EPUB | Supplemental
  • 4289 Views
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Article
Detection and elimination of a novel non-toxigenic Clostridioides difficile strain from the microbiota of a mouse colony
Jeffrey R. Maslanka, Christopher H. Gu, Isma Zarin, Joshua E. Denny, Susan Broadaway, Bryton Fett, Lisa M. Mattei, Seth T. Walk & Michael C. Abt
Article: 1851999
Published online: 11 Dec 2020
AbstractforDetection and elimination of a novel non-toxigenic Clostridioides difficile strain from the microbiota of a mouse colony | Full Text | References | PDF (2.6 MB) | EPUB | Supplemental
  • 1973 Views
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Review

Microbial adaptation to the healthy and inflamed gut environments
Yijie Guo, Sho Kitamoto & Nobuhiko Kamada
Article: 1857505
Published online: 17 Dec 2020
AbstractforMicrobial adaptation to the healthy and inflamed gut environments | Full Text | References | PDF (1.3 MB) | EPUB
  • 2972 Views
  • 21 CrossRef citations
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Efficacy and safety of fecal microbiota transplantation for the treatment of diseases other than Clostridium difficile infection: a systematic review and meta-analysis
Jessica Emily Green, Jessica A. Davis, Michael Berk, Christopher Hair, Amy Loughman, David Castle, Eugene Athan, Andrew A. Nierenberg, John F. Cryan, Felice Jacka & Wolfgang Marx
Article: 1854640
Published online: 19 Dec 2020
AbstractforEfficacy and safety of fecal microbiota transplantation for the treatment of diseases other than Clostridium difficile infection: a systematic review and meta-analysis | Full Text | References | PDF (1.2 MB) | EPUB | Supplemental
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Research Paper

Article
Pomegranate peel extract ameliorates the severity of experimental autoimmune encephalomyelitis via modulation of gut microbiota
Xin-Yu Lu, Bing Han, Xin Deng, Si-Ying Deng, Yan-Yan Zhang, Pei-Xin Shen, Teng Hui, Rui-Heng Chen, Xing Li & Yuan Zhang
Article: 1857515
Published online: 17 Dec 2020
AbstractforPomegranate peel extract ameliorates the severity of experimental autoimmune encephalomyelitis via modulation of gut microbiota | Full Text | References | PDF (6.6 MB) | EPUB | Supplemental
  • 4631 Views
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Review

The aryl hydrocarbon receptor as a mediator of host-microbiota interplay
Fangcong Dong & Gary H. Perdew
Article: 1859812
Published online: 17 Dec 2020
AbstractforThe aryl hydrocarbon receptor as a mediator of host-microbiota interplay | Full Text | References | PDF (1.6 MB) | EPUB
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